Step 1: Input Your Data
Upload a BED file containing your genomic regions of interest or paste the data directly into the text area. The BED file should contain at minimum three columns: chromosome, start position, and end position.
Step 2: Select Analysis Options
Choose whether to use a custom background or the default background. If using a custom background, upload your background BED file or paste the data.
Step 3: Select Pathway Database
Choose one or more pathway databases for enrichment analysis.
Step 4: Run Analysis
Click the "Run Analysis" button to start the process. Please note:
- The analysis may take several minutes to complete depending on the size of your input data and selected options.
- During analysis, a progress bar will indicate the current status.
- Do not close the browser window or navigate away from this page while the analysis is running.
- Once complete, results will be displayed below the form, organized into collapsible sections.
Step 5: Interpret Results
Results include:
- Plots: Visual representations of enrichment analysis results
- Logs: Detailed information about the analysis process
- Output Files: Downloadable data files for further analysis